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Schema for SNP - SNPs at chromosome |
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Database: bosTau4 Primary Table: snp_pos Row Count: 6,996,606
| field | example | SQL type |
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| bin | 585 | smallint |
| chrom | chr1 | varchar(255) |
| chromStart | 864 | int unsigned |
| chromEnd | 865 | int unsigned |
| name | g -> a | varchar(255) |
| score | 0 | int unsigned |
| strand | . | char(1) |
| thickStart | 864 | int unsigned |
| thickEnd | 865 | int unsigned |
| itemRgb | 6684927 | int unsigned |
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| bin | chrom | chromStart | chromEnd | name | score | strand | thickStart | thickEnd | itemRgb |
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| 585 | chr1 | 864 | 865 | g -> a | 0 | . | 864 | 865 | 6684927 |
| 585 | chr1 | 914 | 915 | g -> n | 0 | . | 914 | 915 | 6684927 |
| 585 | chr1 | 1483 | 1484 | t -> c | 0 | . | 1483 | 1484 | 6684927 |
| 585 | chr1 | 3846 | 3847 | a -> c | 0 | . | 3846 | 3847 | 6684927 |
| 585 | chr1 | 4027 | 4028 | t -> c | 0 | . | 4027 | 4028 | 6684927 |
| 585 | chr1 | 4153 | 4154 | c -> g | 0 | . | 4153 | 4154 | 6684927 |
| 585 | chr1 | 4162 | 4163 | t -> a | 0 | . | 4162 | 4163 | 6684927 |
| 585 | chr1 | 4173 | 4174 | g -> a | 0 | . | 4173 | 4174 | 6684927 |
| 585 | chr1 | 4228 | 4229 | g -> a | 0 | . | 4228 | 4229 | 6684927 |
| 585 | chr1 | 4399 | 4400 | g -> a | 0 | . | 4399 | 4400 | 6684927 |
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Note: all start coordinates in our database are 0-based, not
1-based. See explanation
here.
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